Search results

Handle Kleborate's dynamic file naming

Status: Open.

#120 In ssi-dk/MMASeq;

· KasperThystrup opened on Mar 19, 2026

Samplesheet config file exist check

important

Status: Open.

#119 In ssi-dk/MMASeq;

· KasperThystrup opened on Mar 12, 2026

Decide location of .snakemake

Status: Open.

#114 In ssi-dk/MMASeq;

· KasperThystrup opened on Mar 2, 2026

Version text of Assemblers

Status: Open.

#112 In ssi-dk/MMASeq;

· KasperThystrup opened on Feb 11, 2026

mlst_setup rule fails

bugSomething isn't workingSomething isn't working

Status: Open.

#111 In ssi-dk/MMASeq;

· SimoneScrima opened on Feb 6, 2026

Access to analysis/ folder after package installation

enhancementNew feature or requestNew feature or request

Status: Open.

#109 In ssi-dk/MMASeq;

· KasperThystrup opened on Jan 15, 2026

Provide warnings for unknown Modules and potentially unused keywords

Status: Open.

#108 In ssi-dk/MMASeq;

· KasperThystrup opened on Jan 14, 2026

MLST db-dl script no longer supported

Status: Open.

#104 In ssi-dk/MMASeq;

· KasperThystrup opened on Dec 9, 2025

Clean up workflow/scripts folder and sort out smk files

Status: Open.

#100 In ssi-dk/MMASeq;

· KasperThystrup opened on Dec 2, 2025

Create a Wrangler

Status: Open.

#99 In ssi-dk/MMASeq;

· KasperThystrup opened on Dec 2, 2025

Add support MLST for E.coli and A.Baumanii (RAR)

Status: Open.

#86 In ssi-dk/MMASeq;

· SimoneScrima opened on Oct 20, 2025

Command for supported databases, assemblies, and organisms

enhancementNew feature or requestNew feature or request

Status: Open.

#78 In ssi-dk/MMASeq;

· KasperThystrup opened on Oct 2, 2025