masstools

masstools is a part of tidymass

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About

masstools is a collections of useful tiny tools for mass spectrometry data processing.

Installation

You can install masstools from Bioconductor (recommended):

if (!requireNamespace("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("masstools")

Alternatively, for development purposes, you can install from GitHub:

if(!require(remotes)){
install.packages("remotes")
}
remotes::install_github("tidymass/masstools")

Note: Installing from GitHub is not recommended for production use. Please install from the Bioconductor release or devel branch for the most stable and tested version.

You can also install from GitLab:

remotes::install_gitlab("tidymass/masstools")

Usage

Please see the Help documents page to get the instruction of masstools.

Need help?

If you have any questions about masstools, please don’t hesitate to email me (shenxt@stanford.edu) or reach out me via the social medias below.

shenxt1990

shenxt@stanford.edu

Twitter

M339, Alway Buidling, Cooper Lane, Palo Alto, CA 94304

Citation

If you use masstools in your publications, please cite this paper:

Shen, X., Yan, H., Wang, C. et al. TidyMass an object-oriented reproducible analysis framework for LC–MS data. Nat Commun 13, 4365 (2022).

Weblink

Thanks very much!