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add --common option #1

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add --common option #1

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9 changes: 9 additions & 0 deletions scripts/network_compare.py
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Original file line number Diff line number Diff line change
Expand Up @@ -14,6 +14,7 @@ def log(msg):
parser.add_argument('--dst-spf', help="Dest SimplePathwayFile")
parser.add_argument('--src-xgmml', help="Source XGMML File")
parser.add_argument('--dst-xgmml', help="Dest XGMML File")
parser.add_argument('--common',help="Print common nodes")

args = parser.parse_args()

Expand Down Expand Up @@ -47,6 +48,14 @@ def log(msg):
log("Node Counts %d %d" % (len(gr1.nodes()), len(gr2.nodes())))
log("Edge Counts %d %d" % (len(gr1.edges()), len(gr2.edges())))


if args.common:
common_count = 0
for n in gr1.node:
if n in gr2.node:
common_count+=1
log("Common " +n)
log( "Nodes in both networks: %d %4.1f %% of first network and %4.1f %% of second " % (common_count, (float)(100*common_count/len(gr1.nodes())), (float)(100*common_count/len(gr2.nodes() ))))
for n in gr1.node:
if n not in gr2.node:
log( "Graph2 Missing Node:" + n )
Expand Down