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Merge branch 'master' into metamaps

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Run Linting on: pull_request 5

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nf-core-changes

nf-core lint modules (metamaps/classify)

nf-core lint modules (metamaps/mapdirectly)

nf-core lint subworkflows

confirm-pass-lint

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nf-test-changes

x64 | conda | 1

x64 | docker | 1

x64 | singularity | 1

x64 | conda | 2

x64 | docker | 2

x64 | singularity | 2

x64 | conda | 3

x64 | docker | 3

x64 | singularity | 3

x64 | conda | 4

x64 | docker | 4

x64 | singularity | 4

confirm-pass-nf-test

labeler on: pull_request

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check-files

confirm-pass-gpu

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check-files

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Run GPU nf-tests on: pull_request

nf-test-changes

GPU Test | g4dn.xlarge | ${{ matrix.profile }} | ${{ matrix.shard }}

GPU Test | g4dn.2xlarge | ${{ matrix.profile }} | ${{ matrix.shard }}

confirm-pass-gpu

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Graphite / mergeability_check

nf-core-changes

succeeded Jul 14, 2026 in 12s

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